From 29 September to 2 October, 2025
RADseq Data Analysis
This course focuses on the analysis of restriction site-associated DNA sequencing (RADseq) data for identifying and genotyping single nucleotide polymorphisms (SNPs), a key technique for genotyping non-model organisms. These methods enable the detection of thousands of genetic variants in hundreds of individuals quickly and cost-effectively.
Participants will explore various methods for generating and analysing these data, with a special focus on bioinformatic analysis using Stacks software. The course will also include an introduction to both basic and advanced Unix concepts.
Target audience: Technical staff, postgraduate students, and researchers interested in the analysis of reduced representation genomic sequencing (RRGS) data — such as RAD-seq, ddRAD, 2bRAD, GBS — applied mainly to non-model organisms, with or without a reference genome.
Requirements: Basic biology knowledge and familiarity with genomic data derived from next-generation sequencing (NGS) technologies. Programming knowledge is recommended.
Instructors:
Natalia Díaz Arce (AZTI)
Naiara Rodríguez-Ezpeleta (AZTI)
WHEN & WHERE
29/09/2025 to 02/10/2025
9:00 am to 4:00 pm (1-hour lunch break)
ParcBit, Complex I+D building
Free with prior registration